S. Kautz, B. E. Rubin, and C. S. Moreau, Bacterial Infections across the Ants: Frequency and Prevalence ofWolbachia, Spiroplasma, andAsaia, Psyche: A Journal of Entomology, vol.2013, pp.1-11, 2013.

R. E. Ley, M. Hamady, C. Lozupone, P. J. Turnbaugh, R. R. Ramey et al., Evolution of Mammals and Their Gut Microbes, Science, vol.320, issue.5883, pp.1647-1651, 2008.

M. O. Ramalho, O. C. Bueno, and C. S. Moreau, Species-specific signatures of the microbiome from Camponotus and Colobopsis ants across developmental stages, PLOS ONE, vol.12, issue.11, p.e0187461, 2017.

M. O. Ramalho, O. C. Bueno, and C. S. Moreau, Microbial composition of spiny ants (Hymenoptera: Formicidae: Polyrhachis) across their geographic range, BMC Evolutionary Biology, vol.17, issue.1, p.96, 2017.

G. Roeselers, E. K. Mittge, W. Z. Stephens, D. M. Parichy, C. M. Cavanaugh et al., Evidence for a core gut microbiota in the zebrafish, The ISME Journal, vol.5, issue.10, pp.1595-1608, 2011.

J. G. Sanders, S. Powell, D. J. Kronauer, H. L. Vasconcelos, M. E. Frederickson et al., Stability and phylogenetic correlation in gut microbiota: lessons from ants and apes, Molecular Ecology, vol.23, issue.6, pp.1268-1283, 2014.

T. Schuelke, T. J. Pereira, S. M. Hardy, and H. M. Bik, Nematode-associated microbial taxa do not correlate with host phylogeny, geographic region or feeding morphology in marine sediment habitats, Molecular Ecology, vol.27, issue.8, pp.1930-1951, 2018.

K. E. Anderson, J. A. Russell, C. S. Moreau, S. Kautz, K. E. Sullam et al., Highly similar microbial communities are shared among related and trophically similar ant species, Molecular Ecology, vol.21, issue.9, pp.2282-2296, 2012.

C. F. Funaro, D. J. Kronauer, C. S. Moreau, B. Goldman-huertas, N. E. Pierce et al., Army Ants Harbor a Host-Specific Clade ofEntomoplasmatalesBacteria, Applied and Environmental Microbiology, vol.77, issue.1, pp.346-350, 2010.

Y. Hu, J. G. Sanders, P. ?ukasik, C. L. D?amelio, J. S. Millar et al., Herbivorous turtle ants obtain essential nutrients from a conserved nitrogen-recycling gut microbiome, Nature Communications, vol.9, issue.1, p.964, 2018.

P. ?ukasik, J. A. Newton, J. G. Sanders, Y. Hu, C. S. Moreau et al., The structured diversity of specialized gut symbionts of the New World army ants, Molecular Ecology, vol.26, issue.14, pp.3808-3825, 2017.

J. A. Russell, C. S. Moreau, B. Goldman-huertas, M. Fujiwara, D. J. Lohman et al., Bacterial gut symbionts are tightly linked with the evolution of herbivory in ants, Proceedings of the National Academy of Sciences, vol.106, issue.50, pp.21236-21241, 2009.

J. G. Sanders, P. ?ukasik, M. E. Frederickson, J. A. Russell, R. Koga et al., Dramatic Differences in Gut Bacterial Densities Correlate with Diet and Habitat in Rainforest Ants, Integrative and Comparative Biology, vol.57, issue.4, pp.705-722, 2017.

B. E. Rubin, S. Kautz, B. D. Wray, and C. S. Moreau, Dietary specialization in mutualistic acacia-ants affects relative abundance but not identity of host-associated bacteria, Molecular Ecology, vol.28, issue.4, pp.900-916, 2018.

N. A. Moran and P. Baumann, Bacterial endosymbionts in animals, Current Opinion in Microbiology, vol.3, issue.3, pp.270-275, 2000.

H. Ishikawa, Biochemical and Molecular Aspects of Endosymbiosis in Insects, International Review of Cytology, vol.116, pp.1-45, 1989.

C. S. Moreau, C. D. Bell, R. Vila, S. B. Archibald, and N. E. Pierce, Phylogeny of the Ants: Diversification in the Age of Angiosperms, Science, vol.312, issue.5770, pp.101-104, 2006.

H. Feldhaar, J. Straka, M. Krischke, K. Berthold, S. Stoll et al., Nutritional upgrading for omnivorous carpenter ants by the endosymbiont Blochmannia, BMC Biology, vol.5, issue.1, p.48, 2007.

M. O. Ramalho, C. Martins, L. M. Silva, V. G. Martins, and O. C. Bueno, Intracellular Symbiotic Bacteria of Camponotus textor, Forel (Hymenoptera, Formicidae), Current Microbiology, vol.74, issue.5, pp.589-597, 2017.

J. J. Wernegreen, S. N. Kauppinen, S. G. Brady, and P. S. Ward, One nutritional symbiosis begat another: Phylogenetic evidence that the ant tribe Camponotini acquired Blochmannia by tending sap-feeding insects, BMC Evolutionary Biology, vol.9, issue.1, p.292, 2009.

Y. Hu, P. ?ukasik, C. S. Moreau, and J. A. Russell, Correlates of gut community composition across an ant species (Cephalotes varians) elucidate causes and consequences of symbiotic variability, Molecular Ecology, vol.23, issue.6, pp.1284-1300, 2013.

E. O. Wilson, Behavior of Daceton armigerum (Latreille), with a classification of self-grooming movements in ants, Bulletin of the Museum of Comparative Zoology, vol.127, pp.401-422, 1962.

A. Dejean, J. H. Delabie, B. Corbara, F. Azémar, S. Groc et al., The Ecology and Feeding Habits of the Arboreal Trap-Jawed Ant Daceton armigerum, PLoS ONE, vol.7, issue.5, p.e37683, 2012.
URL : https://hal.archives-ouvertes.fr/hal-00825759

D. W. Davidson, S. C. Cook, R. R. Snelling, and T. H. Chua, Explaining the Abundance of Ants in Lowland Tropical Rainforest Canopies, Science, vol.300, issue.5621, pp.969-972, 2003.

B. E. Rubin, J. G. Sanders, J. Hampton-marcell, S. M. Owens, J. A. Gilbert et al., DNA extraction protocols cause differences in 16S rRNA amplicon sequencing efficiency but not in community profile composition or structure, MicrobiologyOpen, vol.3, issue.6, pp.910-921, 2014.

C. S. Moreau, A practical guide to DNA extraction, PCR, and gene-based DNA sequencing in insects, Halteres, vol.5, pp.32-42, 2014.

J. G. Caporaso, C. L. Lauber, W. A. Walters, D. Berg-lyons, J. Huntley et al., Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms, The ISME Journal, vol.6, issue.8, pp.1621-1624, 2012.

S. Creer, Ultrasequencing of the meiofaunal biosphere: practice, pitfalls and promises, Mol. Ecol, vol.19, pp.4-20, 2010.

E. Bolyen, Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2, Nat. Biotechnol, vol.37, pp.852-857, 2019.

B. J. Callahan, P. J. Mcmurdie, M. J. Rosen, A. W. Han, A. J. Johnson et al., DADA2: High-resolution sample inference from Illumina amplicon data, Nature Methods, vol.13, issue.7, pp.581-583, 2016.

D. Mcdonald, J. C. Clemente, J. Kuczynski, J. R. Rideout, J. Stombaugh et al., The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome, GigaScience, vol.1, issue.1, p.7, 2012.

C. Quast, E. Pruesse, P. Yilmaz, J. Gerken, T. Schweer et al., The SILVA ribosomal RNA gene database project: improved data processing and web-based tools, Nucleic Acids Research, vol.41, issue.D1, pp.D590-D596, 2012.

P. Yilmaz, L. W. Parfrey, P. Yarza, J. Gerken, E. Pruesse et al., The SILVA and ?All-species Living Tree Project (LTP)? taxonomic frameworks, Nucleic Acids Research, vol.42, issue.D1, pp.D643-D648, 2013.

N. A. Bokulich, B. D. Kaehler, J. R. Rideout, M. Dillon, E. Bolyen et al., Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2?s q2-feature-classifier plugin, Microbiome, vol.6, issue.1, p.90, 2018.

N. M. Davis, D. M. Proctor, S. P. Holmes, D. A. Relman, and B. J. Callahan, Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data, Microbiome, vol.6, issue.1, p.226, 2018.

, New discount card available for dental nurses, BDJ Team, vol.6, issue.9, pp.22-22, 2019.

K. Katoh and D. M. Standley, MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability, Mol. Biol. Evol, vol.30, pp.772-780, 2013.

M. N. Price, P. S. Dehal, and A. P. Arkin, FastTree 2 ? Approximately Maximum-Likelihood Trees for Large Alignments, PLoS ONE, vol.5, issue.3, p.e9490, 2010.

Y. Vázquez-baeza, M. Pirrung, A. Gonzalez, and R. Knight, EMPeror: a tool for visualizing high-throughput microbial community data, GigaScience, vol.2, issue.1, p.16, 2013.

M. J. Anderson, A new method for non-parametric multivariate analysis of variance, Austral Ecology, vol.26, issue.1, pp.32-46, 2001.

K. R. Clarke, Non-parametric multivariate analyses of changes in community structure, Austral Ecology, vol.18, issue.1, pp.117-143, 1993.

M. O. Ramalho, C. Duplais, J. Orivel, A. Dejean, J. C. Gibson et al., Development but not diet alters microbial communities in the Neotropical arboreal trap jaw ant Daceton armigerum: an exploratory study, Scientific Reports, vol.10, issue.1, p.7350, 2020.
URL : https://hal.archives-ouvertes.fr/hal-03001851

Ø. Hammer, D. A. Harper, and P. D. Ryan, Paleontological Data Analysis, Palaeontol. Electron, pp.1-9, 2005.

B. Mccune and J. B. Grace, Analysis of Ecological Communities (MjM Software Design), 2002.

P. J. Mcmurdie and S. Holmes, phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data, PLoS ONE, vol.8, issue.4, p.e61217, 2013.

H. Wickham, Ggplot2: elegant graphics for data analysis, 2009.

J. D. Hunter, Matplotlib: A 2D Graphics Environment, Computing in Science & Engineering, vol.9, issue.3, pp.90-95, 2007.

T. Hall, Multiple sequence alignment methods, Biological Sequence Analysis, pp.135-160, 1998.

D. G. Higgins, A. J. Bleasby, and R. Fuchs, CLUSTAL V: improved software for multiple sequence alignment, Bioinformatics, vol.8, issue.2, pp.189-191, 1992.

S. Guindon, J. Dufayard, V. Lefort, M. Anisimova, W. Hordijk et al., New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0, Systematic Biology, vol.59, issue.3, pp.307-321, 2010.
URL : https://hal.archives-ouvertes.fr/lirmm-00511784

M. A. Miller, W. Pfeiffer, and T. Schwartz, Creating the CIPRES Science Gateway for inference of large phylogenetic trees, 2010 Gateway Computing Environments Workshop (GCE), 2010.

M. Groussin, F. Mazel, J. G. Sanders, C. S. Smillie, S. Lavergne et al., Unraveling the processes shaping mammalian gut microbiomes over evolutionary time, Nature Communications, vol.8, issue.1, p.14319, 2017.

M. C. Lanan, P. A. Rodrigues, A. Agellon, P. Jansma, and D. E. Wheeler, A bacterial filter protects and structures the gut microbiome of an insect, The ISME Journal, vol.10, issue.8, pp.1866-1876, 2016.

C. S. Moreau and B. E. Rubin, Diversity and Persistence of the Gut Microbiome of the Giant Neotropical Bullet Ant, Integrative and Comparative Biology, vol.57, issue.4, pp.682-689, 2017.

A. S. Vieira, M. O. Ramalho, C. Martins, V. G. Martins, and O. C. Bueno, Microbial Communities in Different Tissues of Atta sexdens rubropilosa Leaf-cutting Ants, Current Microbiology, vol.74, issue.10, pp.1216-1225, 2017.

G. Bisch, M. Neuvonen, N. E. Pierce, J. A. Russell, R. Koga et al., Genome Evolution of Bartonellaceae Symbionts of Ants at the Opposite Ends of the Trophic Scale, Genome Biology and Evolution, vol.10, issue.7, pp.1687-1704, 2018.

H. K. Larson, S. K. Goffredi, E. L. Parra, O. Vargas, A. A. Pinto-tomas et al., Distribution and dietary regulation of an associated facultative Rhizobiales-related bacterium in the omnivorous giant tropical ant, Paraponera clavata, Naturwissenschaften, vol.101, issue.5, pp.397-406, 2014.

M. Neuvonen, D. Tamarit, K. Näslund, J. Liebig, H. Feldhaar et al., The genome of Rhizobiales bacteria in predatory ants reveals urease gene functions but no genes for nitrogen fixation, Scientific Reports, vol.6, issue.1, p.39197, 2016.

A. Dussutour and S. J. Simpson, Ant workers die young and colonies collapse when fed a high-protein diet, Proceedings of the Royal Society B: Biological Sciences, vol.279, issue.1737, pp.2402-2408, 2012.
URL : https://hal.archives-ouvertes.fr/hal-02345063

S. Kautz, B. E. Rubin, J. A. Russell, and C. S. Moreau, Surveying the Microbiome of Ants: Comparing 454 Pyrosequencing with Traditional Methods To Uncover Bacterial Diversity, Applied and Environmental Microbiology, vol.79, issue.2, pp.525-534, 2012.

L. A. Meirelles, Q. S. Mcfrederick, A. Rodrigues, J. D. Mantovani, C. De-melo-rodovalho et al., Bacterial microbiomes from vertically transmitted fungal inocula of the leaf-cutting antAtta texana, Environmental Microbiology Reports, vol.8, issue.5, pp.630-640, 2016.

Y. Hu, D. A. Holway, P. ?ukasik, L. Chau, A. D. Kay et al., By their own devices: invasive Argentine ants have shifted diet without clear aid from symbiotic microbes, Molecular Ecology, vol.26, issue.6, pp.1608-1630, 2017.

K. Kellner, H. D. Ishak, T. A. Linksvayer, and U. G. Mueller, Bacterial community composition and diversity in an ancestral ant fungus symbiosis, FEMS Microbiology Ecology, vol.91, issue.7, p.fiv073, 2015.

J. Ryu, S. Kim, H. Lee, J. Y. Bai, Y. Nam et al., Innate Immune Homeostasis by the Homeobox Gene Caudal and Commensal-Gut Mutualism in Drosophila, Science, vol.319, issue.5864, pp.777-782, 2008.

J. Ryu, E. Ha, and W. Lee, Innate immunity and gut?microbe mutualism in Drosophila, Developmental & Comparative Immunology, vol.34, issue.4, pp.369-376, 2010.

B. A. Daisley, M. Trinder, T. W. Mcdowell, H. Welle, J. S. Dube et al., Neonicotinoid-induced pathogen susceptibility is mitigated by Lactobacillus plantarum immune stimulation in a Drosophila melanogaster model, Scientific Reports, vol.7, issue.1, p.2703, 2017.

H. Koch, G. Cisarovsky, and P. Schmid-hempel, Ecological effects on gut bacterial communities in wild bumblebee colonies, Journal of Animal Ecology, vol.81, issue.6, pp.1202-1210, 2012.

H. Koch and P. Schmid-hempel, Socially transmitted gut microbiota protect bumble bees against an intestinal parasite, Proceedings of the National Academy of Sciences, vol.108, issue.48, pp.19288-19292, 2011.

. Schmid-hempel, Parasites in Social Insects, P. Parasites in Social Insects, 1999.

W. Zhou, K. Chow, E. Fleming, and J. Oh, Selective colonization ability of human fecal microbes in different mouse gut environments, The ISME Journal, vol.13, issue.3, pp.805-823, 2018.

A. K. Benson, Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors, Proc. Natl. Acad. Sci. U. S. A, vol.107, pp.18933-18941, 2010.

J. Vaahtovuo, P. Toivanen, and E. Eerola, Bacterial composition of murine fecal microflora is indigenous and genetically guided, FEMS Microbiol. Ecol, vol.44, pp.131-136, 2003.

R. S. Esworthy, D. D. Smith, and F. Chu, A Strong Impact of Genetic Background on Gut Microflora in Mice, Int. J. Inflam, p.986046, 2010.

F. Azorsa and J. Sosa-calvo, Description of a remarkable new species of ant in the genus Daceton Perty (Formicidae: Dacetini) from South America, Zootaxa, vol.1749, pp.27-38, 2008.

T. Yang, J. Z. Groenewald, R. Cheewangkoon, F. Jami, J. Abdollahzadeh et al., Families, genera, and species of Botryosphaeriales, Fungal Biology, vol.121, issue.4, pp.322-346, 2017.

C. A. Duran and R. Mayen-estrada, Ciliate species from tank-less bromeliads in a dry tropical forest and their geographical distribution in the Neotropics, 2018.

S. J. Costa, Ciliados endêmicos (Alveolata, Ciliophora) que habitam fitotelmata em bromélias do Parque Estadual do Ibitipoca, 2019.

J. Y. De-waal, M. F. Addison, and A. P. Malan, Potential of Heterorhabditis zealandica (Rhabditida: Heterorhabditidae) for the control of codling moth, Cydia pomonella (Lepidoptera: Tortricidae) in semi-field trials under South African conditions, Int. J. Pest Manag, vol.64, pp.102-109, 2018.

S. D. Foye, C. M. Greenwood, and K. E. Risser, Virulence of Entomopathogenic Nematodes Native to Western Oklahoma againstDiorhabda carinulata(Faldermann, 1837) (Coleoptera: Chrysomelidae), The Coleopterists Bulletin, vol.70, issue.1, pp.149-152, 2016.